-
recipe
r-sequenza
Tools to analyze genomic sequencing data from paired normal-tumor samples, including cellularity and ploidy estimation; mutation and copy number (allele-specific and total copy number) detection, quantification and visualization.
- Homepage
https://sequenzatools.bitbucket.io, Mailing list: https://groups.google.com/forum/#!forum/sequenza-user-group
- License
GPL3 / GPL-3
- Recipe
- Links
-
package
r-sequenza
¶ -
- Versions
3.0.0-2
,3.0.0-1
,3.0.0-0
,2.1.2-2
,2.1.2-1
,2.1.2-0
- Depends
r-base
>=4.0,<4.1.0a0
- Required By
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install r-sequenza
and update with:
conda update r-sequenza
or use the docker container:
docker pull quay.io/biocontainers/r-sequenza:<tag>
(see r-sequenza/tags for valid values for
<tag>
)
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/r-sequenza/README.html)