recipe r-tigger

Infers the V genotype of an individual from immunoglobulin (Ig) repertoire sequencing data (AIRR-Seq, Rep-Seq). Includes detection of any novel alleles. This information is then used to correct existing V allele calls from among the sample sequences. Citations: Gadala-Maria, et al (2015) <doi:10.1073/pnas.1417683112>.

Homepage

http://tigger.readthedocs.io

License

CC / CC BY-SA 4.0

Recipe

/r-tigger/meta.yaml

package r-tigger

(downloads) docker_r-tigger

Versions

0.4.0-1, 0.4.0-0, 0.3.1-1, 0.3.1-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install r-tigger

and update with:

conda update r-tigger

or use the docker container:

docker pull quay.io/biocontainers/r-tigger:<tag>

(see r-tigger/tags for valid values for <tag>)