recipe sortmerna

SortMeRNA is a biological sequence analysis tool for filtering, mapping and OTU-picking NGS reads.

Homepage:

http://bioinfo.lifl.fr/RNA/sortmerna

License:

LGPL

Recipe:

/sortmerna/meta.yaml

Links:

biotools: sortmerna, doi: 10.1093/bioinformatics/bts611, usegalaxy-eu: bg_sortmerna

package sortmerna

(downloads) docker_sortmerna

Versions:
4.3.6-0,  4.3.4-0,  4.3.3-0,  4.3.2-1,  4.3.2-0,  4.3.1-1,  4.3.1-0,  4.2.0-1,  4.2.0-0, 

4.3.6-0,  4.3.4-0,  4.3.3-0,  4.3.2-1,  4.3.2-0,  4.3.1-1,  4.3.1-0,  4.2.0-1,  4.2.0-0,  2.1b-4,  2.1b-3,  2.1b-2,  2.1b-1,  2.1b-0,  2.0-4,  2.0-3,  2.0-2,  2.0-1,  2.0-0

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install sortmerna

and update with:

conda update sortmerna

or use the docker container:

docker pull quay.io/biocontainers/sortmerna:<tag>

(see sortmerna/tags for valid values for <tag>)

Download stats

Link to this page

Render an install-with-bioconda badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/sortmerna/README.html)