recipe r-DGEclustering

DGEclustering is an R package for multidimensional clustering of differential gene expression datasets, and it integrates GO annotations to improve the clustering result.

Homepage

https://github.com/reneechou123/DGEclustering

License

MIT

Recipe

/r-DGEclustering/meta.yaml

package r-dgeclustering

(downloads) docker_r-dgeclustering

Versions

0.1.0-0

Depends bioconductor-annotationdbi

Depends bioconductor-clusterprofiler

Depends bioconductor-genomicfeatures

Depends bioconductor-gosemsim

Depends r-base

>=3.4.1,<3.4.2.0a0

Depends r-cluster

Depends r-factominer

Depends r-ggplot2

Depends r-intego

Depends r-reshape2

Depends r-rlist

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install r-dgeclustering

and update with:

conda update r-dgeclustering

or use the docker container:

docker pull quay.io/biocontainers/r-dgeclustering:<tag>

(see r-dgeclustering/tags for valid values for <tag>)