abricate

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Mass screening of contigs for antibiotic resistance genes

Home https://github.com/tseemann/abricate
Versions 0.2, 0.3
License GPL2
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/abricate

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install abricate

and update with:

conda update abricate

docker

A Docker container is available at https://quay.io/repository/biocontainers/abricate.