recipe angsd

ANGSD: Analysis of next generation Sequencing Data

Homepage

http://www.popgen.dk/angsd/index.php/ANGSD

License

GPLv3, MIT

Recipe

/angsd/meta.yaml

Links

biotools: angsd, doi: 10.1186/s12859-014-0356-4

package angsd

Versions

0.933-1,  0.933-0,  0.931-1,  0.931-0,  0.923-0,  0.921-2,  0.921-1,  0.921-0,  0.910-0

Depends

• bzip2 >=1.0.8,<2.0a0

• htslib >=1.10.2,<1.11.0a0

• libgcc-ng >=7.5.0

• libstdcxx-ng >=7.5.0

• xz >=5.2.5,<5.3.0a0

• zlib >=1.2.11,<1.3.0a0

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install angsd

and update with:

conda update angsd

or use the docker container:

docker pull quay.io/biocontainers/angsd:<tag>

(see angsd/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/angsd/README.html)