recipe anvio-minimal

An interactive analysis and visualization platform for omics data

Homepage

http://merenlab.org/software/anvio/

Developer docs

https://github.com/merenlab/anvio

License

GPL3 / GPL-3.0-or-later

Recipe

/anvio-minimal/meta.yaml

package anvio-minimal

Versions

7.1-0,  7-0,  6.2-1,  6.2-0,  6.1-1,  6.1-0,  6-0,  5.5.0-0,  5.4.0-0, 

7.1-0,  7-0,  6.2-1,  6.2-0,  6.1-1,  6.1-0,  6-0,  5.5.0-0,  5.4.0-0,  5.3.0-0,  5.2.0-1,  5.2.0-0

Depends

• bottle

• colored

• django

• ete3

• illumina-utils

• matplotlib-base

• mistune

• numba

• numpy

• pandas 0.25.1

• paste

• psutil 5.4.3

• pyani 0.2.10

• pysam

• python >=3

• requests

• scikit-learn <0.21

• scipy

• six

• snakemake-minimal 5.10.0

• sqlite >=3.36.0,<4.0a0

• statsmodels

• tabulate

Required By

• anvio

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install anvio-minimal

and update with:

conda update anvio-minimal

or use the docker container:

docker pull quay.io/biocontainers/anvio-minimal:<tag>

(see anvio-minimal/tags for valid values for <tag>)

Download stats

Link to this page

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