recipe anvio-minimal

An interactive analysis and visualization platform for omics data

Homepage

http://merenlab.org/software/anvio/index.html

Developer docs

https://github.com/merenlab/anvio

License

GPL3 / GPL-3.0-or-later

Recipe

/anvio-minimal/meta.yaml

package anvio-minimal

Versions

6.2-1, 6.2-0, 6.1-1, 6.1-0, 6-0, 5.5.0-0, 5.4.0-0, 5.3.0-0, 5.2.0-1, 5.2.0-0

Depends

• bottle

• cherrypy 8.0.0

• colored

• django

• ete3

• illumina-utils

• matplotlib-base

• mistune

• numba

• numpy

• pandas 0.25.1

• psutil 5.4.3

• pyani 0.2.10

• pysam

• python >=3

• requests

• scikit-learn

• scipy

• six

• snakemake-minimal 5.10.0

• statsmodels

• tabulate

Required By

• anvio

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install anvio-minimal

and update with:

conda update anvio-minimal

or use the docker container:

docker pull quay.io/biocontainers/anvio-minimal:<tag>

(see anvio-minimal/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/anvio-minimal/README.html)