recipe anvio-minimal

An interactive analysis and visualization platform for omics data

Homepage

http://merenlab.org/software/anvio/index.html

Developer docs

https://github.com/merenlab/anvio

License

GPL3 / GPL-3.0-or-later

Recipe

/anvio-minimal/meta.yaml

package anvio-minimal

Versions

5.5.0-0, 5.4.0-0, 5.3.0-0, 5.2.0-1, 5.2.0-0

Depends bottle

0.12.13

Depends cherrypy

>=8,<9

Depends colored

1.3.93

Depends django

2.0.8

Depends ete3

3.1.1

Depends gsl

>=2.4,<2.5.0a0

Depends h5py

>=2.8.0

Depends illumina-utils

2.6

Depends libgcc-ng

>=7.3.0

Depends matplotlib

2.2.3

Depends mistune

0.8.1

Depends numpy

Depends openblas

>=0.3.6,<0.3.7.0a0

Depends pandas

>=0.23.1

Depends psutil

5.4.3

Depends pyani

0.2.7

Depends pysam

0.15.2

Depends python

>=3.6,<3.7.0a0

Depends requests

2.20.0

Depends scikit-learn

0.19.2

Depends scipy

>=0.13.3

Depends six

1.11.0

Depends snakemake-minimal

5.2.4

Depends statsmodels

0.9.0

Depends tabulate

0.8.3

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install anvio-minimal

and update with:

conda update anvio-minimal

or use the docker container:

docker pull quay.io/biocontainers/anvio-minimal:<tag>

(see anvio-minimal/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/anvio-minimal/README.html)