recipe aquila

Diploid personal genome assembly and comprehensive variant detection based on linked-reads

Homepage

https://github.com/maiziex/Aquila

License

MIT

Recipe

/aquila/meta.yaml

package aquila

Versions

1.0.0-0

Depends

• minimap2

• numpy

• pysam >=0.15.2

• python >=3

• samtools

• scipy

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install aquila

and update with:

conda update aquila

or use the docker container:

docker pull quay.io/biocontainers/aquila:<tag>

(see aquila/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/aquila/README.html)