recipe aquilasv

A region-based diploid assembly and variants calling tool

Homepage:

https://github.com/maiziezhoulab/AquilaSV

License:

MIT

Recipe:

/aquilasv/meta.yaml

package aquilasv

Versions:

1.5-0,  1.4-0,  1.3-0,  1.1-0

Depends:

• minimap2

• numpy

• pysam

• python >=3

• samtools

• scipy

• spades

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install aquilasv

and update with:

conda update aquilasv

or use the docker container:

docker pull quay.io/biocontainers/aquilasv:<tag>

(see aquilasv/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/aquilasv/README.html)