recipe argparse2tool

Instrument for forming Galaxy XML and CWL tool descriptions from argparse arguments



Apache / Apache-2.0



package argparse2tool

(downloads) docker_argparse2tool



depends click:

depends galaxyxml:


depends jinja2:

depends python:




You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install argparse2tool

and update with::

   mamba update argparse2tool

To create a new environment, run:

mamba create --name myenvname argparse2tool

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull<tag>

(see `argparse2tool/tags`_ for valid values for ``<tag>``)

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