recipe args_oap

ARGs-OAP: Online Analysis Pipeline for Antibiotic Resistance Genes Detection from Metagenomic Data Using an Integrated Structured ARG Database

Homepage:

https://github.com/xinehc/args_oap

License:

MIT / MIT

Recipe:

/args_oap/meta.yaml

package args_oap

Versions:

3.2.2-0,  3.2.1-0,  3.2-0

Depends:

• blast >=2.12

• bwa >=0.7.17

• diamond >=2.0.15

• pandas

• python >=3.7

• samtools >=1.15

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install args_oap

and update with:

conda update args_oap

or use the docker container:

docker pull quay.io/biocontainers/args_oap:<tag>

(see args_oap/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/args_oap/README.html)