- recipe ataqv
ataqv is a toolkit for measuring and comparing ATAC-seq results. It was written to help understand how well ATAC-seq assays have worked, and to make it easier to spot differences that might be caused by library prep or sequencing.
- Homepage:
- Documentation:
- Developer docs:
- License:
GPL3
- Recipe:
- package ataqv¶
-
- Versions:
1.3.1-2
,1.3.1-1
,1.3.1-0
,1.3.0-4
,1.3.0-3
,1.3.0-2
,1.3.0-1
,1.3.0-0
,1.2.1-2
,1.3.1-2
,1.3.1-1
,1.3.1-0
,1.3.0-4
,1.3.0-3
,1.3.0-2
,1.3.0-1
,1.3.0-0
,1.2.1-2
,1.2.1-1
,1.2.1-0
,1.1.1-2
,1.1.1-1
,1.1.1-0
,1.0.0-1
,1.0.0-0
- Depends:
boost-cpp
>=1.78.0,<1.78.1.0a0
htslib
>=1.17,<1.18.0a0
libgcc-ng
>=12
libstdcxx-ng
>=12
libzlib
>=1.2.13,<1.3.0a0
ncurses
>=6.3,<7.0a0
python
>=3.10,<3.11.0a0
python_abi
3.10.* *_cp310
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install ataqv
and update with:
conda update ataqv
or use the docker container:
docker pull quay.io/biocontainers/ataqv:<tag>
(see ataqv/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/ataqv/README.html)