recipe bam-readcount

bam-readcount generates metrics at single nucleotide positions.

Homepage:

https://github.com/genome/bam-readcount

License:

MIT

Recipe:

/bam-readcount/meta.yaml

package bam-readcount

Versions:

0.8-4,  0.8-3,  0.8-2,  0.8-1

Depends:

• libgcc-ng >=7.3.0

• ncurses >=6.1,<6.2.0a0

• perl >=5.26.2,<5.26.3.0a0

• python >=2.7,<2.8.0a0

• zlib >=1.2.11,<1.3.0a0

Required By:

• deepsvr

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bam-readcount

and update with:

conda update bam-readcount

or use the docker container:

docker pull quay.io/biocontainers/bam-readcount:<tag>

(see bam-readcount/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bam-readcount/README.html)