recipe bam-readcount

bam-readcount generates metrics at single nucleotide positions.

Homepage

https://github.com/genome/bam-readcount

License

MIT

Recipe

/bam-readcount/meta.yaml

package bam-readcount

(downloads) docker_bam-readcount

Versions

0.8-4, 0.8-3, 0.8-2, 0.8-1

Depends

  • libgcc-ng >=7.3.0

  • ncurses >=6.1,<6.2.0a0

  • perl >=5.26.2,<5.26.3.0a0

  • python >=2.7,<2.8.0a0

  • zlib >=1.2.11,<1.3.0a0

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bam-readcount

and update with:

conda update bam-readcount

or use the docker container:

docker pull quay.io/biocontainers/bam-readcount:<tag>

(see bam-readcount/tags for valid values for <tag>)

Link to this page

Render an install-with-bioconda badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bam-readcount/README.html)