- recipe bam2fastx
Converting and demultiplexing of PacBio BAM files into gzipped fasta and fastq files
- Homepage:
- License:
BSD-3-Clause-Clear
- Recipe:
- package bam2fastx¶
-
- Versions:
1.3.1-2
,1.3.1-1
,1.3.1-0
,1.3.0-8
,1.3.0-7
,1.3.0-6
,1.3.0-5
,1.3.0-4
,1.3.0-3
,1.3.1-2
,1.3.1-1
,1.3.1-0
,1.3.0-8
,1.3.0-7
,1.3.0-6
,1.3.0-5
,1.3.0-4
,1.3.0-3
,1.3.0-2
,1.3.0-1
,1.3.0-0
- Depends:
libgcc-ng
>=10.3.0
libstdcxx-ng
>=10.3.0
libzlib
>=1.2.11,<1.3.0a0
pbbam
>=1.6.0
pbcopper
>=1.8.0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bam2fastx
and update with:
conda update bam2fastx
or use the docker container:
docker pull quay.io/biocontainers/bam2fastx:<tag>
(see bam2fastx/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bam2fastx/README.html)