recipe bamtools

C++ API & command-line toolkit for working with BAM data

Homepage:

https://github.com/pezmaster31/bamtools

License:

MIT

Recipe:

/bamtools/meta.yaml

Links:

biotools: bamtools

package bamtools

Versions:

2.5.2-2,  2.5.2-1,  2.5.2-0,  2.5.1-10,  2.5.1-9,  2.5.1-7,  2.5.1-6,  2.5.1-5,  2.5.1-4, 

2.5.2-2,  2.5.2-1,  2.5.2-0,  2.5.1-10,  2.5.1-9,  2.5.1-7,  2.5.1-6,  2.5.1-5,  2.5.1-4,  2.5.1-3,  2.5.1-2,  2.5.1-0,  2.4.1-1,  2.4.1-0,  2.4.0-3,  2.4.0-2,  2.4.0-1,  2.4.0-0,  2.3.0-2,  2.3.0-1,  2.3.0-0

Depends:

• libgcc-ng >=12

• libstdcxx-ng >=12

• libzlib >=1.2.13,<1.3.0a0

Required By:

• bioconvert

• genomics-data-index

• massiveqc

• idemuxcpp

• leehom

• vphaser2

• frc

• funannotate

• braker2

• rgi

• telseq

• augustus

• smeg

• braker3

• grid

• sga

• comparative-annotation-toolkit

• cage

• tpmcalculator

• repdenovo

• piret

• libgab

• encode-blacklist

• vulcan

• transcomb

• piranha

• scalpel

• hla-la

• ngs-disambiguate

• covtobed

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bamtools

and update with:

conda update bamtools

or use the docker container:

docker pull quay.io/biocontainers/bamtools:<tag>

(see bamtools/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

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