recipe bamtools

C++ API & command-line toolkit for working with BAM data

Homepage:

https://github.com/pezmaster31/bamtools

License:

MIT

Recipe:

/bamtools/meta.yaml

Links:

biotools: bamtools

package bamtools

Versions:

2.5.2-0,  2.5.1-10,  2.5.1-9,  2.5.1-7,  2.5.1-6,  2.5.1-5,  2.5.1-4,  2.5.1-3,  2.5.1-2, 

2.5.2-0,  2.5.1-10,  2.5.1-9,  2.5.1-7,  2.5.1-6,  2.5.1-5,  2.5.1-4,  2.5.1-3,  2.5.1-2,  2.5.1-0,  2.4.1-1,  2.4.1-0,  2.4.0-3,  2.4.0-2,  2.4.0-1,  2.4.0-0,  2.3.0-2,  2.3.0-1,  2.3.0-0

Depends:

• libgcc-ng >=10.3.0

• libstdcxx-ng >=10.3.0

• libzlib >=1.2.11,<1.3.0a0

Required By:

• telseq

• ngs-disambiguate

• tpmcalculator

• genomics-data-index

• transcomb

• augustus

• funannotate

• massiveqc

• frc

• sga

• cage

• piret

• smeg

• vphaser2

• braker2

• rgi

• hla-la

• idemuxcpp

• vulcan

• scalpel

• libgab

• grid

• comparative-annotation-toolkit

• piranha

• repdenovo

• encode-blacklist

• bioconvert

• covtobed

• leehom

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bamtools

and update with:

conda update bamtools

or use the docker container:

docker pull quay.io/biocontainers/bamtools:<tag>

(see bamtools/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bamtools/README.html)