recipe bamtools

C++ API & command-line toolkit for working with BAM data

Homepage

https://github.com/pezmaster31/bamtools

License

MIT

Recipe

/bamtools/meta.yaml

Links

biotools: bamtools

package bamtools

Versions

2.5.1-5, 2.5.1-4, 2.5.1-3, 2.5.1-2, 2.5.1-0, 2.4.1-1, 2.4.1-0, 2.4.0-3, 2.4.0-2, 2.4.0-1, 2.4.0-0, 2.3.0-2, 2.3.0-1, 2.3.0-0

Depends

• libgcc-ng >=7.3.0

• libstdcxx-ng >=7.3.0

• zlib >=1.2.11,<1.3.0a0

Required By

• smeg

• vphaser2

• braker2

• telseq

• ngs-disambiguate

• funannotate

• piranha

• bioconvert

• piret

• sga

• scalpel

• grid

• rgi

• encode-blacklist

• comparative-annotation-toolkit

• repdenovo

• tpmcalculator

• frc

• transcomb

• cage

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bamtools

and update with:

conda update bamtools

or use the docker container:

docker pull quay.io/biocontainers/bamtools:<tag>

(see bamtools/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bamtools/README.html)