recipe barrnap

Barrnap predicts the location of ribosomal RNA genes in genomes. (bacteria, archaea, metazoan mitochondria and eukaryotes.)

Homepage:

https://github.com/tseemann/barrnap

License:

GPLv3

Recipe:

/barrnap/meta.yaml

Links:

biotools: barrnap

package barrnap

Versions:

0.9-4,  0.9-3,  0.9-2,  0.9-1,  0.9-0,  0.8-1,  0.8-0,  0.7-4,  0.7-3, 

0.9-4,  0.9-3,  0.9-2,  0.9-1,  0.9-0,  0.8-1,  0.8-0,  0.7-4,  0.7-3,  0.7-2,  0.7-1,  0.7-0,  0.3-2,  0.3-1,  0.3-0,  0.2-1,  0.2-0

Depends:

• bedtools

• hmmer >=3.1b

• perl

Required By:

• dfast

• markermag

• socru

• mdmcleaner

• riboseed

• barrnap-python

• dram

• prokka

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install barrnap

and update with:

conda update barrnap

or use the docker container:

docker pull quay.io/biocontainers/barrnap:<tag>

(see barrnap/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

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