recipe bcalm

BCALM 2 is a bioinformatics tool for constructing the compacted de Bruijn graph from sequencing data.

Homepage

https://github.com/GATB/bcalm

License

MIT License

Recipe

/bcalm/meta.yaml

package bcalm

(downloads) docker_bcalm

Versions

2.2.1-2, 2.2.1-1, 2.2.1-0, 2.2.0-3, 2.2.0-2, 2.2.0-0

Depends
  • libgcc-ng >=7.3.0

  • libstdcxx-ng >=7.3.0

  • zlib >=1.2.11,<1.3.0a0

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bcalm

and update with:

conda update bcalm

or use the docker container:

docker pull quay.io/biocontainers/bcalm:<tag>

(see bcalm/tags for valid values for <tag>)