bcbio-nextgen

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Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis

Home https://github.com/chapmanb/bcbio-nextgen
Versions 0.9.5, 0.9.6, 0.9.6a, 0.9.7, 0.9.7a, 0.9.8, 0.9.8a0, 0.9.9, 0.9.9a0, 1.0.0, 1.0.0a0, 1.0.1, 1.0.1a0, 1.0.2, 1.0.2a, 1.0.3a
License MIT
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bcbio-nextgen

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bcbio-nextgen

and update with:

conda update bcbio-nextgen

docker

A Docker container is available at https://quay.io/repository/biocontainers/bcbio-nextgen.