recipe bedtools

A powerful toolset for genome arithmetic

Homepage

http://bedtools.readthedocs.org/

License

GPL v2

Recipe

/bedtools/meta.yaml

Links

biotools: bedtools

package bedtools

(downloads) docker_bedtools

Versions

2.28.0-0, 2.27.1-3, 2.27.1-2, 2.27.1-1, 2.27.1-0, 2.27.0-3, 2.27.0-2, 2.27.0-1, 2.27.0-0, 2.26.0-0, 2.26.0gx-3, 2.26.0gx-2, 2.26.0gx-1, 2.26.0gx-0, 2.25.0-5, 2.25.0-4, 2.25.0-3, 2.25.0-2, 2.25.0-1, 2.25.0-0, 2.24.0-0, 2.23.0-3, 2.23.0-2, 2.23.0-1, 2.23.0-0, 2.22-3, 2.22-2, 2.22-1, 2.22-0, 2.20.1-2, 2.20.1-1, 2.20.1-0, 2.19.1-2, 2.19.1-1, 2.19.1-0, 2.17.0-0, 2.16.2-1, 2.16.2-0

Depends bzip2

>=1.0.6,<2.0a0

Depends curl

>=7.64.1,<8.0a0

Depends libdeflate

>=1.0,<1.1.0a0

Depends libgcc-ng

>=7.3.0

Depends libstdcxx-ng

>=7.3.0

Depends xz

>=5.2.4,<5.3.0a0

Depends zlib

>=1.2.11,<1.3.0a0

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bedtools

and update with:

conda update bedtools

or use the docker container:

docker pull quay.io/biocontainers/bedtools:<tag>

(see bedtools/tags for valid values for <tag>)