recipe bio_hansel

Subtype Salmonella enterica genomes using 33bp k-mer typing schemes.

Homepage

https://github.com/phac-nml/biohansel

License

GPL3 / GNU General Public License v3 or later (GPLv3+)

Recipe

/bio_hansel/meta.yaml

'Subtype Salmonella enterica genomes using 33bp k-mer typing schemes. ' 'Includes schemes for Heidelberg and Enteritidis subtyping.'

package bio_hansel

(downloads) docker_bio_hansel

Versions
2.4.0-02.2.0-12.2.0-02.1.1-02.1.0-02.0.0-12.0.0-01.3.2-01.3.1-0

2.4.0-02.2.0-12.2.0-02.1.1-02.1.0-02.0.0-12.0.0-01.3.2-01.3.1-01.3.0-01.2.0-01.1.3-01.1.1-01.1.0-00.2.0-10.1.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bio_hansel

and update with:

conda update bio_hansel

or use the docker container:

docker pull quay.io/biocontainers/bio_hansel:<tag>

(see bio_hansel/tags for valid values for <tag>)