recipe bio_hansel

Subtype Salmonella enterica genomes using 33bp k-mer typing schemes.\nIncludes schemes for Heidelberg and Enteritidis subtyping.\nDeveloped by Genevieve Labbe, James Robertson, Peter Kruczkiewicz, Marisa Rankin, Matthew Gopez, Chad R. Laing, Philip Mabon, Kim Ziebell, Aleisha R. Reimer, Lorelee Tschetter, Gary Van Domselaar, Eduardo N. Taboada, Sadjia Bekal, Kimberley A. MacDonald, Linda Hoang, Linda Chui, Danielle Daignault, Durda Slavic, Frank Pollari, E. Jane Parmley, David Son, Darian Hole, Elissa Giang, Lok Kan Lee, Jonathan Moffat, Joanne MacKinnon, Benjamin M. Hetman, Roger Johnson, John H.E. Nash.\n

Homepage

https://github.com/phac-nml/biohansel

License

GPL3 / GNU General Public License v3 or later (GPLv3+)

Recipe

/bio_hansel/meta.yaml

package bio_hansel

(downloads) docker_bio_hansel

Versions

2.2.0-0, 2.1.1-0, 2.1.0-0, 2.0.0-1, 2.0.0-0, 1.3.2-0, 1.3.1-0, 1.3.0-0, 1.2.0-0, 1.1.3-0, 1.1.1-0, 1.1.0-0, 0.2.0-1, 0.1.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bio_hansel

and update with:

conda update bio_hansel

or use the docker container:

docker pull quay.io/biocontainers/bio_hansel:<tag>

(see bio_hansel/tags for valid values for <tag>)