recipe biobb_common

Biobb_common is the base package required to use the biobb packages.

Homepage:

https://github.com/bioexcel/biobb_common

Documentation:

https://biobb-common.readthedocs.io/en/latest/

License:

APACHE / Apache Software License

Recipe:

/biobb_common/meta.yaml

[](https://biobb-common.readthedocs.io/en/latest/?badge=latest)

# biobb_common

### Introduction Biobb_common is the base package required to use the biobb packages. Biobb (BioExcel building blocks) packages are Python building blocks that create new layer of compatibility and interoperability over popular bioinformatics tools. The latest documentation of this package can be found in our readthedocs site: [latest API documentation](http://biobb_common.readthedocs.io/en/latest/).

### Copyright & Licensing ### Copyright & Licensing This software has been developed in the [MMB group](http://mmb.irbbarcelona.org) at the [BSC](http://www.bsc.es/) & [IRB](https://www.irbbarcelona.org/) for the [European BioExcel](http://bioexcel.eu/), funded by the European Commission (EU H2020 [823830](http://cordis.europa.eu/projects/823830), EU H2020 [675728](http://cordis.europa.eu/projects/675728)).

* (c) 2015-2023 [Barcelona Supercomputing Center](https://www.bsc.es/) * (c) 2015-2023 [Institute for Research in Biomedicine](https://www.irbbarcelona.org/) Licensed under the [Apache License 2.0](https://www.apache.org/licenses/LICENSE-2.0), see the file LICENSE for details.


package biobb_common

Versions:

4.0.0-0,  3.9.0-0,  3.8.1-0,  3.7.0-0,  3.6.0-1,  3.6.0-0,  3.5.1-0,  3.5.0-0,  3.0.1-0, 

4.0.0-0,  3.9.0-0,  3.8.1-0,  3.7.0-0,  3.6.0-1,  3.6.0-0,  3.5.1-0,  3.5.0-0,  3.0.1-0,  3.0.0-0,  2.0.1-0,  2.0.0-0,  1.1.6-0,  0.1.5-0,  0.1.4-0,  0.1.2-0,  0.0.8-0,  0.0.6-0,  0.0.5-0,  0.0.4-0,  0.0.3-0

Depends:

• biopython 1.79

• python >=3.7,<=3.10

• pyyaml

• requests

Required By:

• biobb_vs

• biobb_cp2k

• biobb_dna

• biobb_flexserv

• biobb_structure_utils

• biobb_wf_mutations

• biobb_amber

• biobb_godmd

• biobb_cmip

• biobb_md

• biobb_chemistry

• biobb_analysis

• biobb_gromacs

• biobb_io

• biobb_pmx

• biobb_model

• biobb_ml

• biobb_flexdyn

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install biobb_common

and update with:

conda update biobb_common

or use the docker container:

docker pull quay.io/biocontainers/biobb_common:<tag>

(see biobb_common/tags for valid values for <tag>)

Download stats

Link to this page

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