recipe biobb_flexserv

Biobb_flexserv is the Biobb module collection for biomolecular flexibility studies on protein 3D structures.

Homepage:

https://github.com/bioexcel/biobb_flexserv

License:

APACHE / Apache Software License

Recipe:

/biobb_flexserv/meta.yaml

biobb_flexserv allows the generation of protein conformational ensembles from 3D structures and the analysis of its molecular flexibility. It is based on the work included in the FlexServ server (https://mmb.irbbarcelona.org/FlexServ/, Camps et. al., FlexServ: an integrated tool for the analysis of protein flexibility, Bioinformatics, Volume 25, Issue 13, 1 July 2009, Pages 1709–1710, https://doi.org/10.1093/bioinformatics/btp304). Biobb (BioExcel building blocks) packages are Python building blocks that create new layer of compatibility and interoperability over popular

bioinformatics tools.

The latest documentation of this package can be found in our readthedocs site: http://biobb_vs.readthedocs.io/en/latest/).

package biobb_flexserv

Versions:

4.0.2-0,  4.0.1-0,  4.0.0-1,  4.0.0-0,  3.9.1-1,  3.9.1-0

Depends:

• biobb_common 4.0.0

• flexserv 1.0.2

• pcasuite 1.0.0

• perl >=5.32.1,<6.0a0 *_perl5

• python >=3.7,<3.10

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install biobb_flexserv

and update with:

conda update biobb_flexserv

or use the docker container:

docker pull quay.io/biocontainers/biobb_flexserv:<tag>

(see biobb_flexserv/tags for valid values for <tag>)

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