recipe biobb_structure_utils

Biobb_structure_utils is the Biobb module collection to modify or extract information from a PDB structure file.

Homepage

https://github.com/bioexcel/biobb_structure_utils

License

APACHE / Apache Software License

Recipe

/biobb_structure_utils/meta.yaml

[![](https://readthedocs.org/projects/biobb-structure-utils/badge/?version=latest)](https://biobb-structure-utils.readthedocs.io/en/latest/?badge=latest) [![](https://img.shields.io/badge/License-Apache%202.0-blue.svg)](https://opensource.org/licenses/Apache-2.0)

# biobb_structure_utils

Biobb_structure_utils is the Biobb module collection to modify or extract information from a PDB structure file, such as pulling out a particular model or chain, removing water molecules or ligands, or renumbering or sorting atoms or residues. Biobb (BioExcel building blocks) packages are Python building blocks that create new layer of compatibility and interoperability over popular bioinformatics tools. The latest documentation of this package can be found in our readthedocs site: [latest API documentation](http://biobb_structure_utils.readthedocs.io/en/latest/).

### Copyright & Licensing This software has been developed in the [MMB group](http://mmb.irbbarcelona.org) at the [BSC](http://www.bsc.es/) & [IRB](https://www.irbbarcelona.org/) for the [European BioExcel](http://bioexcel.eu/), funded by the European Commission (EU H2020 [823830](http://cordis.europa.eu/projects/823830), EU H2020 [675728](http://cordis.europa.eu/projects/675728)).

* (c) 2015-2019 [Barcelona Supercomputing Center](https://www.bsc.es/) * (c) 2015-2019 [Institute for Research in Biomedicine](https://www.irbbarcelona.org/) Licensed under the [Apache License 2.0](https://www.apache.org/licenses/LICENSE-2.0), see the file LICENSE for details.

![](https://bioexcel.eu/wp-content/uploads/2019/04/Bioexcell_logo_1080px_transp.png "Bioexcel")

package biobb_structure_utils

(downloads) docker_biobb_structure_utils

Versions

3.0.0-02.0.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install biobb_structure_utils

and update with:

conda update biobb_structure_utils

or use the docker container:

docker pull quay.io/biocontainers/biobb_structure_utils:<tag>

(see biobb_structure_utils/tags for valid values for <tag>)