- recipe biobb_structure_utils
Biobb_structure_utils is the Biobb module collection to modify or extract information from a PDB structure file.
- Homepage:
- License:
APACHE / Apache Software License
- Recipe:
[](https://biobb-structure-utils.readthedocs.io/en/latest/?badge=latest) [](https://opensource.org/licenses/Apache-2.0)
# biobb_structure_utils
Biobb_structure_utils is the Biobb module collection to modify or extract information from a PDB structure file, such as pulling out a particular model or chain, removing water molecules or ligands, or renumbering or sorting atoms or residues. Biobb (BioExcel building blocks) packages are Python building blocks that create new layer of compatibility and interoperability over popular bioinformatics tools. The latest documentation of this package can be found in our readthedocs site: [latest API documentation](http://biobb_structure_utils.readthedocs.io/en/latest/).
### Copyright & Licensing This software has been developed in the [MMB group](http://mmb.irbbarcelona.org) at the [BSC](http://www.bsc.es/) & [IRB](https://www.irbbarcelona.org/) for the [European BioExcel](http://bioexcel.eu/), funded by the European Commission (EU H2020 [823830](http://cordis.europa.eu/projects/823830), EU H2020 [675728](http://cordis.europa.eu/projects/675728)).
* (c) 2015-2023 [Barcelona Supercomputing Center](https://www.bsc.es/) * (c) 2015-2023 [Institute for Research in Biomedicine](https://www.irbbarcelona.org/) Licensed under the [Apache License 2.0](https://www.apache.org/licenses/LICENSE-2.0), see the file LICENSE for details.

- package biobb_structure_utils¶
-
- Versions:
4.0.0-0
,3.9.0-0
,3.8.0-0
,3.7.6-0
,3.7.4-0
,3.7.3-0
,3.7.2-0
,3.7.1-0
,3.7.0-0
,4.0.0-0
,3.9.0-0
,3.8.0-0
,3.7.6-0
,3.7.4-0
,3.7.3-0
,3.7.2-0
,3.7.1-0
,3.7.0-0
,3.6.1-0
,3.6.0-0
,3.5.3-0
,3.5.2-0
,3.5.1-0
,3.5.0-0
,3.0.1-0
,3.0.0-0
,2.0.0-0
- Depends:
biobb_common
4.0.0
biobb_structure_checking
3.12.1
python
>=3.7,<=3.10
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install biobb_structure_utils
and update with:
conda update biobb_structure_utils
or use the docker container:
docker pull quay.io/biocontainers/biobb_structure_utils:<tag>
(see biobb_structure_utils/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/biobb_structure_utils/README.html)