recipe bioconductor-abseqr

AbSeq is a comprehensive bioinformatic pipeline for the analysis of sequencing datasets generated from antibody libraries and abseqR is one of its packages. abseqR empowers the users of abseqPy (https://github.com/malhamdoosh/abseqPy) with plotting and reporting capabilities and allows them to generate interactive HTML reports for the convenience of viewing and sharing with other researchers. Additionally, abseqR extends abseqPy to compare multiple repertoire analyses and perform further downstream analysis on its output.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/abseqR.html

License

GPL-3 | file LICENSE

Recipe

/bioconductor-abseqr/meta.yaml

package bioconductor-abseqr

(downloads) docker_bioconductor-abseqr

Versions

1.2.0-1, 1.2.0-0, 1.0.0-1, 1.0.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-abseqr

and update with:

conda update bioconductor-abseqr

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-abseqr:<tag>

(see bioconductor-abseqr/tags for valid values for <tag>)