recipe bioconductor-abseqr

Reporting and data analysis functionalities for Rep-Seq datasets of antibody libraries



GPL-3 | file LICENSE



AbSeq is a comprehensive bioinformatic pipeline for the analysis of sequencing datasets generated from antibody libraries and abseqR is one of its packages. abseqR empowers the users of abseqPy ( with plotting and reporting capabilities and allows them to generate interactive HTML reports for the convenience of viewing and sharing with other researchers. Additionally, abseqR extends abseqPy to compare multiple repertoire analyses and perform further downstream analysis on its output.

package bioconductor-abseqr

(downloads) docker_bioconductor-abseqr


1.6.0-0, 1.4.0-0, 1.2.0-1, 1.2.0-0, 1.0.0-1, 1.0.0-0

Required By


With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-abseqr

and update with:

conda update bioconductor-abseqr

or use the docker container:

docker pull<tag>

(see bioconductor-abseqr/tags for valid values for <tag>)