- recipe bioconductor-adam
ADAM: Activity and Diversity Analysis Module
- Homepage:
- License:
GPL (>= 2)
- Recipe:
ADAM is a GSEA R package created to group a set of genes from comparative samples (control versus experiment) belonging to different species according to their respective functions (Gene Ontology and KEGG pathways as default) and show their significance by calculating p-values referring togene diversity and activity. Each group of genes is called GFAG (Group of Functionally Associated Genes).
- package bioconductor-adam¶
-
- Versions:
1.14.0-0
,1.10.0-2
,1.10.0-1
,1.10.0-0
,1.8.0-0
,1.6.0-1
,1.6.0-0
,1.4.0-0
,1.2.0-0
,1.14.0-0
,1.10.0-2
,1.10.0-1
,1.10.0-0
,1.8.0-0
,1.6.0-1
,1.6.0-0
,1.4.0-0
,1.2.0-0
,1.0.0-1
- Depends:
bioconductor-go.db
>=3.16.0,<3.17.0
bioconductor-keggrest
>=1.38.0,<1.39.0
bioconductor-summarizedexperiment
>=1.28.0,<1.29.0
libblas
>=3.9.0,<4.0a0
libgcc-ng
>=12
liblapack
>=3.9.0,<4.0a0
libstdcxx-ng
>=12
r-base
>=4.2,<4.3.0a0
r-dplyr
>=0.7.6
r-dt
>=0.4
r-pbapply
>=1.3-4
r-rcpp
>=0.12.18
r-stringr
>=1.3.1
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bioconductor-adam
and update with:
conda update bioconductor-adam
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-adam:<tag>
(see bioconductor-adam/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-adam/README.html)