recipe bioconductor-adsplit

Annotation-Driven Clustering

Homepage

https://bioconductor.org/packages/3.11/bioc/html/adSplit.html

License

GPL (>= 2)

Recipe

/bioconductor-adsplit/meta.yaml

This package implements clustering of microarray gene expression profiles according to functional annotations. For each term genes are annotated to, splits into two subclasses are computed and a significance of the supporting gene set is determined.

package bioconductor-adsplit

Versions

1.58.0-0, 1.56.0-0, 1.54.0-1, 1.52.0-0, 1.50.0-0, 1.48.0-0, 1.46.0-0

Depends

• bioconductor-annotationdbi >=1.50.0,<1.51.0

• bioconductor-biobase >=2.48.0,<2.49.0

• bioconductor-go.db >=3.11.0,<3.12.0

• bioconductor-kegg.db >=3.2.0,<3.3.0

• bioconductor-multtest >=2.44.0,<2.45.0

• libblas >=3.8.0,<4.0a0

• libgcc-ng >=7.3.0

• liblapack >=3.8.0,<3.9.0a0

• libstdcxx-ng >=7.3.0

• r-base >=4.0,<4.1.0a0

• r-cluster >=1.9.1

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-adsplit

and update with:

conda update bioconductor-adsplit

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-adsplit:<tag>

(see bioconductor-adsplit/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

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