recipe bioconductor-adsplit

Annotation-Driven Clustering

Homepage

https://bioconductor.org/packages/3.14/bioc/html/adSplit.html

License

GPL (>= 2)

Recipe

/bioconductor-adsplit/meta.yaml

This package implements clustering of microarray gene expression profiles according to functional annotations. For each term genes are annotated to, splits into two subclasses are computed and a significance of the supporting gene set is determined.

package bioconductor-adsplit

Versions

1.64.0-0,  1.62.0-0,  1.60.0-1,  1.60.0-0,  1.58.0-0,  1.56.0-0,  1.54.0-1,  1.52.0-0,  1.50.0-0, 

1.64.0-0,  1.62.0-0,  1.60.0-1,  1.60.0-0,  1.58.0-0,  1.56.0-0,  1.54.0-1,  1.52.0-0,  1.50.0-0,  1.48.0-0,  1.46.0-0

Depends

• bioconductor-annotationdbi >=1.56.0,<1.57.0

• bioconductor-biobase >=2.54.0,<2.55.0

• bioconductor-go.db >=3.14.0,<3.15.0

• bioconductor-keggrest >=1.34.0,<1.35.0

• bioconductor-multtest >=2.50.0,<2.51.0

• libblas >=3.8.0,<4.0a0

• libgcc-ng >=9.4.0

• liblapack >=3.8.0,<4.0a0

• libstdcxx-ng >=9.4.0

• r-base >=4.1,<4.2.0a0

• r-cluster >=1.9.1

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-adsplit

and update with:

conda update bioconductor-adsplit

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-adsplit:<tag>

(see bioconductor-adsplit/tags for valid values for <tag>)

Download stats

Link to this page

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