recipe bioconductor-affixcan

Impute a GReX (Genetically Regulated Expression) for a set of genes in a sample of individuals, using a method based on the Total Binding Affinity (TBA). Statistical models to impute GReX can be trained with a training dataset where the real total expression values are known.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/AffiXcan.html

License

GPL-3

Recipe

/bioconductor-affixcan/meta.yaml

package bioconductor-affixcan

(downloads) docker_bioconductor-affixcan

Versions

1.0.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-affixcan

and update with:

conda update bioconductor-affixcan

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-affixcan:<tag>

(see bioconductor-affixcan/tags for valid values for <tag>)