recipe bioconductor-affy

The package contains functions for exploratory oligonucleotide array analysis. The dependence on tkWidgets only concerns few convenience functions. ‘affy’ is fully functional without it.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/affy.html

License

LGPL (>= 2.0)

Recipe

/bioconductor-affy/meta.yaml

Links

biotools: affy

package bioconductor-affy

(downloads) docker_bioconductor-affy

Versions

1.60.0-0, 1.58.0-0, 1.56.0-0, 1.54.0-0, 1.50.0-0, 1.48.0-0

Depends bioconductor-affyio

>=1.52.0,<1.53.0

Depends bioconductor-biobase

>=2.42.0,<2.43.0

Depends bioconductor-biocgenerics

>=0.28.0,<0.29.0

Depends bioconductor-preprocesscore

>=1.44.0,<1.45.0

Depends bioconductor-zlibbioc

>=1.28.0,<1.29.0

Depends libgcc-ng

>=7.3.0

Depends r-base

>=3.5.1,<3.5.2.0a0

Depends r-biocmanager

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-affy

and update with:

conda update bioconductor-affy

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-affy:<tag>

(see bioconductor-affy/tags for valid values for <tag>)