- recipe bioconductor-ahensdbs
EnsDbs for AnnotationHub
- Homepage:
https://bioconductor.org/packages/3.16/data/annotation/html/AHEnsDbs.html
- License:
Artistic-2.0
- Recipe:
Supplies AnnotationHub with EnsDb Ensembl-based annotation databases for all species. EnsDb SQLite databases are generated separately from Ensembl MySQL databases using functions from the ensembldb package employing the Ensembl Perl API.
- package bioconductor-ahensdbs¶
-
- Versions:
1.1.8-0
,1.1.4-1
,1.1.2-0
,1.0.18-1
,1.0.18-0
,1.0.15-0
,1.0.14-0
,1.0.12-0
,1.0.9-1
,1.1.8-0
,1.1.4-1
,1.1.2-0
,1.0.18-1
,1.0.18-0
,1.0.15-0
,1.0.14-0
,1.0.12-0
,1.0.9-1
,1.0.8-0
- Depends:
bioconductor-annotationhubdata
>=1.28.0,<1.29.0
bioconductor-data-packages
>=20221102
bioconductor-ensembldb
>=2.22.0,<2.23.0
r-base
>=4.2,<4.3.0a0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bioconductor-ahensdbs
and update with:
conda update bioconductor-ahensdbs
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-ahensdbs:<tag>
(see bioconductor-ahensdbs/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-ahensdbs/README.html)