recipe bioconductor-ahensdbs

EnsDbs for AnnotationHub

Homepage:

https://bioconductor.org/packages/3.16/data/annotation/html/AHEnsDbs.html

License:

Artistic-2.0

Recipe:

/bioconductor-ahensdbs/meta.yaml

Supplies AnnotationHub with EnsDb Ensembl-based annotation databases for all species. EnsDb SQLite databases are generated separately from Ensembl MySQL databases using functions from the ensembldb package employing the Ensembl Perl API.

package bioconductor-ahensdbs

Versions:

1.1.8-0,  1.1.4-1,  1.1.2-0,  1.0.18-1,  1.0.18-0,  1.0.15-0,  1.0.14-0,  1.0.12-0,  1.0.9-1, 

1.1.8-0,  1.1.4-1,  1.1.2-0,  1.0.18-1,  1.0.18-0,  1.0.15-0,  1.0.14-0,  1.0.12-0,  1.0.9-1,  1.0.8-0

Depends:

• bioconductor-annotationhubdata >=1.28.0,<1.29.0

• bioconductor-data-packages >=20221102

• bioconductor-ensembldb >=2.22.0,<2.23.0

• curl

• r-base >=4.2,<4.3.0a0

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-ahensdbs

and update with:

conda update bioconductor-ahensdbs

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-ahensdbs:<tag>

(see bioconductor-ahensdbs/tags for valid values for <tag>)

Download stats

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