recipe bioconductor-ahlrbasedbs

LRBaseDbs for AnnotationHub

Homepage

https://bioconductor.org/packages/3.14/data/annotation/html/AHLRBaseDbs.html

License

Artistic-2.0

Recipe

/bioconductor-ahlrbasedbs/meta.yaml

Supplies AnnotationHub with `LRbaseDb` Ligand-Receptor annotation databases for many species. All the SQLite files are generated by our Snakemake workflow [lrbase-workflow](https://github.com/rikenbit/lrbase-workflow). For the details, see the README.md of lrbase-workflow.

package bioconductor-ahlrbasedbs

Versions

1.2.0-0,  0.99.3-0

Depends

• bioconductor-annotationhub >=3.2.0,<3.3.0

• curl >=7.79.1,<8.0a0

• r-base >=4.1,<4.2.0a0

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-ahlrbasedbs

and update with:

conda update bioconductor-ahlrbasedbs

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-ahlrbasedbs:<tag>

(see bioconductor-ahlrbasedbs/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-ahlrbasedbs/README.html)