recipe bioconductor-ahpubmeddbs

SQLites, tibbles, and data.tables for AnnotationHub

Homepage

https://bioconductor.org/packages/3.14/data/annotation/html/AHPubMedDbs.html

License

Artistic-2.0

Recipe

/bioconductor-ahpubmeddbs/meta.yaml

Supplies AnnotationHub with some preprocessed sqlite, tibble, and data.table datasets of PubMed. All the datasets are generated by our Snakemake workflow [pubmed-workflow](https://github.com/rikenbit/pubmed-workflow). For the details, see the README.md of pubmed-workflow.

package bioconductor-ahpubmeddbs

(downloads) docker_bioconductor-ahpubmeddbs

Versions

1.2.0-00.99.8-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-ahpubmeddbs

and update with:

conda update bioconductor-ahpubmeddbs

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-ahpubmeddbs:<tag>

(see bioconductor-ahpubmeddbs/tags for valid values for <tag>)

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