recipe bioconductor-anaquin

Statistical analysis of sequins

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/Anaquin.html

License:

BSD_3_clause + file LICENSE

Recipe:

/bioconductor-anaquin/meta.yaml

The project is intended to support the use of sequins (synthetic sequencing spike-in controls) owned and made available by the Garvan Institute of Medical Research. The goal is to provide a standard open source library for quantitative analysis, modelling and visualization of spike-in controls.

package bioconductor-anaquin

Versions:

2.22.0-0,  2.18.0-0,  2.16.0-0,  2.14.0-1,  2.14.0-0,  2.12.0-0,  2.10.0-0,  2.8.0-1,  2.6.0-0

Depends:

• bioconductor-deseq2 >=1.38.0,<1.39.0

• bioconductor-qvalue >=2.30.0,<2.31.0

• r-base >=4.2,<4.3.0a0

• r-ggplot2 >=2.2.0

• r-knitr

• r-locfit

• r-plyr

• r-rocr

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-anaquin

and update with:

conda update bioconductor-anaquin

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-anaquin:<tag>

(see bioconductor-anaquin/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

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