recipe bioconductor-annotationdbi

Implements a user-friendly interface for querying SQLite-based annotation data packages.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/AnnotationDbi.html

License

Artistic-2.0

Recipe

/bioconductor-annotationdbi/meta.yaml

Links

biotools: annotationdbi, doi: 10.1038/nmeth.3252

package bioconductor-annotationdbi

(downloads) docker_bioconductor-annotationdbi

Versions

1.44.0-0, 1.42.1-0, 1.40.0-0, 1.38.2-0, 1.38.0-0, 1.36.2-0, 1.36.0-1, 1.34.4-1, 1.34.4-0, 1.32.3-0, 1.32.2-0, 1.32.0-0, 1.30.1-0

Depends bioconductor-biobase

>=2.42.0,<2.43.0

Depends bioconductor-biocgenerics

>=0.28.0,<0.29.0

Depends bioconductor-iranges

>=2.16.0,<2.17.0

Depends bioconductor-s4vectors

>=0.20.0,<0.21.0

Depends r-base

>=3.5.1,<3.5.2.0a0

Depends r-dbi

Depends r-rsqlite

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-annotationdbi

and update with:

conda update bioconductor-annotationdbi

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-annotationdbi:<tag>

(see bioconductor-annotationdbi/tags for valid values for <tag>)