recipe bioconductor-annotationhub

Client to access AnnotationHub resources

Homepage:

https://bioconductor.org/packages/3.14/bioc/html/AnnotationHub.html

License:

Artistic-2.0

Recipe:

/bioconductor-annotationhub/meta.yaml

Links:

biotools: annotationhub, doi: 10.1038/nmeth.3252

This package provides a client for the Bioconductor AnnotationHub web resource. The AnnotationHub web resource provides a central location where genomic files (e.g., VCF, bed, wig) and other resources from standard locations (e.g., UCSC, Ensembl) can be discovered. The resource includes metadata about each resource, e.g., a textual description, tags, and date of modification. The client creates and manages a local cache of files retrieved by the user, helping with quick and reproducible access.

package bioconductor-annotationhub

(downloads) docker_bioconductor-annotationhub

Versions:
3.2.0-0,  3.0.0-0,  2.22.0-1,  2.22.0-0,  2.20.0-0,  2.18.0-0,  2.16.0-1,  2.14.5-0,  2.14.2-0, 

3.2.0-0,  3.0.0-0,  2.22.0-1,  2.22.0-0,  2.20.0-0,  2.18.0-0,  2.16.0-1,  2.14.5-0,  2.14.2-0,  2.12.1-0,  2.10.1-0,  2.10.0-0,  2.8.2-0,  2.6.0-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-annotationhub

and update with:

conda update bioconductor-annotationhub

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-annotationhub:<tag>

(see bioconductor-annotationhub/tags for valid values for <tag>)

Download stats

Link to this page

Render an install-with-bioconda badge with the following MarkDown:

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