bioconductor-annotationhub¶
This package provides a client for the Bioconductor AnnotationHub web resource. The AnnotationHub web resource provides a central location where genomic files (e.g., VCF, bed, wig) and other resources from standard locations (e.g., UCSC, Ensembl) can be discovered. The resource includes metadata about each resource, e.g., a textual description, tags, and date of modification. The client creates and manages a local cache of files retrieved by the user, helping with quick and reproducible access.
| Home | http://bioconductor.org/packages/3.6/bioc/html/AnnotationHub.html |
| Versions | 2.10.0, 2.10.1, 2.6.0, 2.8.2 |
| License | Artistic-2.0 |
| Recipe | https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-annotationhub |
| Links | biotools: annotationhub, doi: 10.1038/nmeth.3252 |
Installation¶
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-annotationhub
and update with:
conda update bioconductor-annotationhub
A Docker container is available at https://quay.io/repository/biocontainers/bioconductor-annotationhub.
Link to this page¶
Render an 
badge with the following Markdown:
[](http://bioconda.github.io/recipes/bioconductor-annotationhub/README.html)
