recipe bioconductor-antiprofilesdata

Normal colon and cancer preprocessed affy data for antiProfile building.

Homepage

https://bioconductor.org/packages/3.11/data/experiment/html/antiProfilesData.html

License

Artistic-2.0

Recipe

/bioconductor-antiprofilesdata/meta.yaml

Colon normal tissue and cancer samples used in Corrada Bravo, et al. gene expression anti-profiles paper: BMC Bioinformatics 2012, 13:272 doi:10.1186/1471-2105-13-272. Measurements are z-scores obtained from the GeneExpression Barcode in the ‘frma’ package

package bioconductor-antiprofilesdata

Versions

1.24.0-0, 1.22.0-0, 1.20.0-1, 1.18.0-0

Depends

• bioconductor-biobase >=2.48.0,<2.49.0

• curl >=7.69.1,<8.0a0

• r-base >=4.0,<4.1.0a0

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-antiprofilesdata

and update with:

conda update bioconductor-antiprofilesdata

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-antiprofilesdata:<tag>

(see bioconductor-antiprofilesdata/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-antiprofilesdata/README.html)