recipe bioconductor-anvil

Bioconductor on the AnVIL compute environment

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/AnVIL.html

License:

Artistic-2.0

Recipe:

/bioconductor-anvil/meta.yaml

The AnVIL is a cloud computing resource developed in part by the National Human Genome Research Institute. The AnVIL package provides end-user and developer functionality. For the end-user, AnVIL provides fast binary package installation, utitlities for working with Terra / AnVIL table and data resources, and convenient functions for file movement to and from Google cloud storage. For developers, AnVIL provides programatic access to the Terra, Leonardo, Rawls, Dockstore, and Gen3 RESTful programming interface, including helper functions to transform JSON responses to formats more amenable to manipulation in R.

package bioconductor-anvil

Versions:

1.10.0-0,  1.6.0-0,  1.4.0-0,  1.2.0-1,  1.2.0-0,  1.0.3-0

Depends:

• r-base >=4.2,<4.3.0a0

• r-biocmanager

• r-dplyr

• r-dt

• r-futile.logger

• r-htmltools

• r-httr

• r-jsonlite

• r-miniui

• r-rapiclient >=0.1.3

• r-rlang

• r-shiny

• r-tibble

• r-tidyr

• r-tidyselect

Required By:

• bioconductor-terratcgadata

• bioconductor-cbioportaldata

• bioconductor-anvilpublish

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-anvil

and update with:

conda update bioconductor-anvil

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-anvil:<tag>

(see bioconductor-anvil/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-anvil/README.html)