recipe bioconductor-aroma.light

Light-Weight Methods for Normalization and Visualization of Microarray Data using Only Basic R Data Types

Homepage

https://bioconductor.org/packages/3.11/bioc/html/aroma.light.html

License

GPL (>= 2)

Recipe

/bioconductor-aroma.light/meta.yaml

Links

biotools: aroma.light

Methods for microarray analysis that take basic data types such as matrices and lists of vectors. These methods can be used standalone, be utilized in other packages, or be wrapped up in higher-level classes.

package bioconductor-aroma.light

Versions

3.18.0-0,  3.16.0-0,  3.14.0-1,  3.14.0-0,  3.12.0-1,  3.12.0-0,  3.10.0-0,  3.8.0-0,  3.6.0-0, 

3.18.0-0,  3.16.0-0,  3.14.0-1,  3.14.0-0,  3.12.0-1,  3.12.0-0,  3.10.0-0,  3.8.0-0,  3.6.0-0,  3.4.0-0

Depends

• r-base >=4.0,<4.1.0a0

• r-matrixstats >=0.55.0

• r-r.methodss3 >=1.7.1

• r-r.oo >=1.23.0

• r-r.utils >=2.9.0

Required By

• bioconductor-scone

• r-eacon

• bioconductor-edaseq

• r-pscbs

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-aroma.light

and update with:

conda update bioconductor-aroma.light

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-aroma.light:<tag>

(see bioconductor-aroma.light/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-aroma.light/README.html)