recipe bioconductor-arrayexpress

Access the ArrayExpress Repository at EBI and build Bioconductor data structures: ExpressionSet, AffyBatch, NChannelSet

Homepage

https://bioconductor.org/packages/3.9/bioc/html/ArrayExpress.html

License

Artistic-2.0

Recipe

/bioconductor-arrayexpress/meta.yaml

package bioconductor-arrayexpress

Versions

1.42.0-0, 1.40.0-0, 1.38.0-0, 1.36.1-0

Depends

• bioconductor-biobase >=2.42.0,<2.43.0

• bioconductor-limma >=3.38.0,<3.39.0

• bioconductor-oligo >=1.46.0,<1.47.0

• r-base >=3.5.1,<3.5.2.0a0

• r-xml

Required By

• bioconductor-drugvsdisease

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-arrayexpress

and update with:

conda update bioconductor-arrayexpress

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-arrayexpress:<tag>

(see bioconductor-arrayexpress/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-arrayexpress/README.html)