- recipe bioconductor-arrayqualitymetrics
Quality metrics report for microarray data sets
- Homepage:
https://bioconductor.org/packages/3.14/bioc/html/arrayQualityMetrics.html
- License:
LGPL (>= 2)
- Recipe:
- Links:
biotools: arrayqualitymetrics
This package generates microarray quality metrics reports for data in Bioconductor microarray data containers (ExpressionSet, NChannelSet, AffyBatch). One and two color array platforms are supported.
- package bioconductor-arrayqualitymetrics¶
-
- Versions:
3.50.0-0
,3.48.0-0
,3.46.0-1
,3.46.0-0
,3.44.0-0
,3.42.0-0
,3.40.0-1
,3.38.0-0
,3.36.0-0
,3.50.0-0
,3.48.0-0
,3.46.0-1
,3.46.0-0
,3.44.0-0
,3.42.0-0
,3.40.0-1
,3.38.0-0
,3.36.0-0
,3.34.0-0
- Depends:
bioconductor-affy
>=1.72.0,<1.73.0
bioconductor-affyplm
>=1.70.0,<1.71.0
bioconductor-beadarray
>=2.44.0,<2.45.0
bioconductor-biobase
>=2.54.0,<2.55.0
bioconductor-genefilter
>=1.76.0,<1.77.0
bioconductor-limma
>=3.50.0,<3.51.0
bioconductor-vsn
>=3.62.0,<3.63.0
r-base
>=4.1,<4.2.0a0
r-gridsvg
>=1.4-3
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bioconductor-arrayqualitymetrics
and update with:
conda update bioconductor-arrayqualitymetrics
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-arrayqualitymetrics:<tag>
(see bioconductor-arrayqualitymetrics/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-arrayqualitymetrics/README.html)