recipe bioconductor-asgsca

The package provides tools to model and test the association between multiple genotypes and multiple traits, taking into account the prior biological knowledge. Genes, and clinical pathways are incorporated in the model as latent variables. The method is based on Generalized Structured Component Analysis (GSCA).

Homepage

https://bioconductor.org/packages/3.9/bioc/html/ASGSCA.html

License

GPL-3

Recipe

/bioconductor-asgsca/meta.yaml

Links

biotools: asgsca, doi: 10.1002/gepi.21872

package bioconductor-asgsca

(downloads) docker_bioconductor-asgsca

Versions

1.18.0-1, 1.18.0-0, 1.16.0-0, 1.14.0-0, 1.12.0-0, 1.10.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-asgsca

and update with:

conda update bioconductor-asgsca

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-asgsca:<tag>

(see bioconductor-asgsca/tags for valid values for <tag>)

Link to this page

Render an install-with-bioconda badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-asgsca/README.html)