recipe bioconductor-asurat

Functional annotation-driven unsupervised clustering for single-cell data

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/ASURAT.html

License:

GPL-3 + file LICENSE

Recipe:

/bioconductor-asurat/meta.yaml

ASURAT is a software for single-cell data analysis. Using ASURAT, one can simultaneously perform unsupervised clustering and biological interpretation in terms of cell type, disease, biological process, and signaling pathway activity. Inputting a single-cell RNA-seq data and knowledge-based databases, such as Cell Ontology, Gene Ontology, KEGG, etc., ASURAT transforms gene expression tables into original multivariate tables, termed sign-by-sample matrices (SSMs).

package bioconductor-asurat

(downloads) docker_bioconductor-asurat

Versions:

1.2.0-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-asurat

and update with:

conda update bioconductor-asurat

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-asurat:<tag>

(see bioconductor-asurat/tags for valid values for <tag>)

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