recipe bioconductor-bayseq

This package identifies differential expression in high-throughput ‘count’ data, such as that derived from next-generation sequencing machines, calculating estimated posterior likelihoods of differential expression (or more complex hypotheses) via empirical Bayesian methods.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/baySeq.html

License

GPL-3

Recipe

/bioconductor-bayseq/meta.yaml

Links

biotools: bayseq, doi: 10.1186/1471-2105-11-422

package bioconductor-bayseq

(downloads) docker_bioconductor-bayseq

Versions

2.16.0-0, 2.14.0-0, 2.12.0-0, 2.10.0-0

Depends bioconductor-edger

>=3.24.0,<3.25.0

Depends bioconductor-genomicranges

>=1.34.0,<1.35.0

Depends r-abind

Depends r-base

>=3.5.1,<3.5.2.0a0

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-bayseq

and update with:

conda update bioconductor-bayseq

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-bayseq:<tag>

(see bioconductor-bayseq/tags for valid values for <tag>)