recipe bioconductor-bbcanalyzer

BBCAnalyzer is a package for visualizing the relative or absolute number of bases, deletions and insertions at defined positions in sequence alignment data available as bam files in comparison to the reference bases. Markers for the relative base frequencies, the mean quality of the detected bases, known mutations or polymorphisms and variants called in the data may additionally be included in the plots.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/BBCAnalyzer.html

License

LGPL-3

Recipe

/bioconductor-bbcanalyzer/meta.yaml

Links

biotools: bbcanalyzer, doi: 10.1186/s12859-017-1549-4

package bioconductor-bbcanalyzer

(downloads) docker_bioconductor-bbcanalyzer

Versions

1.12.0-0, 1.10.0-0, 1.8.0-0, 1.6.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-bbcanalyzer

and update with:

conda update bioconductor-bbcanalyzer

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-bbcanalyzer:<tag>

(see bioconductor-bbcanalyzer/tags for valid values for <tag>)