Package Recipe 'bioconductor-beachmat'

recipe bioconductor-beachmat¶

Provides a consistent C++ class interface for reading from and writing data to a variety of commonly used matrix types. Ordinary matrices and several sparse/dense Matrix classes are directly supported, third-party S4 classes may be supported by external linkage, while all other matrices are handled by DelayedArray block processing.

Homepage: https://bioconductor.org/packages/3.9/bioc/html/beachmat.html
License: GPL-3
Recipe: /bioconductor-beachmat/meta.yaml

package bioconductor-beachmat¶

Versions: 1.4.0-1, 1.4.0-0, 1.2.1-0, 1.0.1-0
Depends bioconductor-biocgenerics: >=0.28.0,<0.29.0
Depends bioconductor-delayedarray: >=0.8.0,<0.9.0
Depends bioconductor-hdf5array: >=1.10.0,<1.11.0
Depends bioconductor-rhdf5: >=2.26.0,<2.27.0
Depends bioconductor-rhdf5lib: >=1.4.0,<1.5.0
Depends libgcc-ng: >=7.3.0
Depends libstdcxx-ng: >=7.3.0
Depends r-base: >=3.5.1,<3.5.2.0a0
Depends r-rcpp: >=0.12.14
Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-beachmat

and update with:

conda update bioconductor-beachmat

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-beachmat:<tag>

(see bioconductor-beachmat/tags for valid values for <tag>)

Link to this page¶

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-beachmat/README.html)