- recipe bioconductor-beadarray
Quality assessment and low-level analysis for Illumina BeadArray data
- Homepage:
https://bioconductor.org/packages/3.16/bioc/html/beadarray.html
- License:
MIT + file LICENSE
- Recipe:
- Links:
biotools: beadarray
The package is able to read bead-level data (raw TIFFs and text files) output by BeadScan as well as bead-summary data from BeadStudio. Methods for quality assessment and low-level analysis are provided.
- package bioconductor-beadarray¶
-
- Versions:
2.48.0-0
,2.44.0-2
,2.44.0-1
,2.44.0-0
,2.42.0-0
,2.40.0-1
,2.40.0-0
,2.38.0-0
,2.36.0-0
,2.48.0-0
,2.44.0-2
,2.44.0-1
,2.44.0-0
,2.42.0-0
,2.40.0-1
,2.40.0-0
,2.38.0-0
,2.36.0-0
,2.34.0-1
,2.32.0-0
,2.30.0-0
,2.28.0-0
,2.26.1-0
- Depends:
bioconductor-annotationdbi
>=1.60.0,<1.61.0
bioconductor-beaddatapackr
>=1.50.0,<1.51.0
bioconductor-biobase
>=2.58.0,<2.59.0
bioconductor-biocgenerics
>=0.44.0,<0.45.0
bioconductor-genomicranges
>=1.50.0,<1.51.0
bioconductor-illuminaio
>=0.40.0,<0.41.0
bioconductor-iranges
>=2.32.0,<2.33.0
bioconductor-limma
>=3.54.0,<3.55.0
libblas
>=3.9.0,<4.0a0
libgcc-ng
>=12
liblapack
>=3.9.0,<4.0a0
r-base
>=4.2,<4.3.0a0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bioconductor-beadarray
and update with:
conda update bioconductor-beadarray
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-beadarray:<tag>
(see bioconductor-beadarray/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-beadarray/README.html)