recipe bioconductor-beadsorted.saliva.epic

Illumina EPIC data on BeadSorted adult saliva cells

Homepage

https://bioconductor.org/packages/3.14/data/experiment/html/BeadSorted.Saliva.EPIC.html

License

GPL-3

Recipe

/bioconductor-beadsorted.saliva.epic/meta.yaml

Raw data objects used to estimate saliva cell proportion estimates in ewastools. The FlowSorted.Saliva.EPIC object is constructed from saples assayed by Lauren Middleton et. al. (2021).

package bioconductor-beadsorted.saliva.epic

Versions

1.2.0-0,  1.0.0-0

Depends

• bioconductor-experimenthub >=2.2.0,<2.3.0

• bioconductor-minfi >=1.40.0,<1.41.0

• curl >=7.79.1,<8.0a0

• r-base >=4.1,<4.2.0a0

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-beadsorted.saliva.epic

and update with:

conda update bioconductor-beadsorted.saliva.epic

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-beadsorted.saliva.epic:<tag>

(see bioconductor-beadsorted.saliva.epic/tags for valid values for <tag>)

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