Package Recipe 'bioconductor-bearscc'

recipe bioconductor-bearscc

BEARscc (Bayesian ERCC Assesstment of Robustness of Single Cell Clusters)

Homepage:: https://bioconductor.org/packages/3.16/bioc/html/BEARscc.html
License:: GPL-3
Recipe:: /bioconductor-bearscc/meta.yaml

BEARscc is a noise estimation and injection tool that is designed to assess putative single-cell RNA-seq clusters in the context of experimental noise estimated by ERCC spike-in controls.

package bioconductor-bearscc¶

Versions:

1.18.0-0, 1.14.0-0, 1.12.0-0, 1.10.0-1, 1.10.0-0, 1.7.0-0, 1.6.0-0, 1.4.0-1, 1.2.0-0

Depends:

bioconductor-singlecellexperiment >=1.20.0,<1.21.0
r-base >=4.2,<4.3.0a0
r-data.table
r-ggplot2

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-bearscc

and update with:

conda update bioconductor-bearscc

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-bearscc:<tag>

(see bioconductor-bearscc/tags for valid values for <tag>)

Download stats¶

Link to this page¶

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-bearscc/README.html)