-
recipe
bioconductor-bioconcotk
Bioconductor components for general cancer genomics
- Homepage
https://bioconductor.org/packages/3.12/bioc/html/BiocOncoTK.html
- License
Artistic-2.0
- Recipe
Provide a central interface to various tools for genome-scale analysis of cancer studies.
-
package
bioconductor-bioconcotk
¶ -
- Versions
1.10.0-0
,1.8.0-0
,1.6.0-1
,1.4.0-1
,1.2.0-0
- Depends
bioconductor-complexheatmap
>=2.6.0,<2.7.0
bioconductor-curatedtcgadata
>=1.12.0,<1.13.0
bioconductor-genomicfeatures
>=1.42.0,<1.43.0
bioconductor-genomicranges
>=1.42.0,<1.43.0
bioconductor-graph
>=1.68.0,<1.69.0
bioconductor-iranges
>=2.24.0,<2.25.0
bioconductor-rgraphviz
>=2.34.0,<2.35.0
bioconductor-s4vectors
>=0.28.0,<0.29.0
bioconductor-summarizedexperiment
>=1.20.0,<1.21.0
r-base
>=4.0,<4.1.0a0
- Required By
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-bioconcotk
and update with:
conda update bioconductor-bioconcotk
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-bioconcotk:<tag>
(see bioconductor-bioconcotk/tags for valid values for
<tag>
)
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-bioconcotk/README.html)