recipe bioconductor-biocparallel

Bioconductor facilities for parallel evaluation



GPL-2 | GPL-3




biotools: biocparallel, doi: 10.1214/14-STS476

This package provides modified versions and novel implementation of functions for parallel evaluation, tailored to use with Bioconductor objects.

package bioconductor-biocparallel

(downloads) docker_bioconductor-biocparallel



depends libblas:


depends libgcc-ng:


depends liblapack:


depends libstdcxx-ng:


depends r-base:


depends r-bh:

depends r-codetools:

depends r-cpp11:

depends r-futile.logger:

depends r-snow:



You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install bioconductor-biocparallel

and update with::

   mamba update bioconductor-biocparallel

To create a new environment, run:

mamba create --name myenvname bioconductor-biocparallel

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull<tag>

(see `bioconductor-biocparallel/tags`_ for valid values for ``<tag>``)

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