recipe bioconductor-bioimagedbs

Bio- and biomedical imaging dataset for machine learning and deep learning (for ExperimentHub)

Homepage:

https://bioconductor.org/packages/3.16/data/experiment/html/BioImageDbs.html

License:

Artistic-2.0

Recipe:

/bioconductor-bioimagedbs/meta.yaml

The package provides a bioimage dataset for the image analysis using machine learning and deep learning. The dataset includes microscopy imaging data with supervised labels. The data is provided as R list data that can be loaded to Keras/tensorflow in R.

package bioconductor-bioimagedbs

Versions:

1.6.0-0,  1.2.2-1,  1.2.0-0,  1.0.2-0

Depends:

• bioconductor-annotationhub >=3.6.0,<3.7.0

• bioconductor-data-packages >=20221108

• bioconductor-ebimage >=4.40.0,<4.41.0

• bioconductor-experimenthub >=2.6.0,<2.7.0

• curl

• r-animation

• r-base >=4.2,<4.3.0a0

• r-einsum

• r-filesstrings

• r-magick

• r-magrittr

• r-markdown

• r-rmarkdown

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-bioimagedbs

and update with:

conda update bioconductor-bioimagedbs

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-bioimagedbs:<tag>

(see bioconductor-bioimagedbs/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-bioimagedbs/README.html)